04-04-2024, 10:59 PM
(04-04-2024, 07:00 PM)TanTin Wrote:(04-04-2024, 01:21 PM)Арсен Wrote:(03-27-2024, 09:52 PM)TanTin Wrote: I guess this is a bug in Admixtools2. Doesn't matter what dataset we use. We should get the same or near the same results if we specify the same criteria.
But as we see: running the same script - same options - the results are disaster.
This is only for groups statistics.
When I run F4 on individuals I get perfect and stable results.
The bug is definately in Admixtools.
Thanks for confirming that you already have seen that.
dude, teach me how to use this program, question, do I have to download heavy bam ENA files from data library sites for this? and do you need a serious, powerful processor to calculate mixtures?
There is already such topic in Eupedia. Start from there.
https://www.eupedia.com/forum/threads/ad...ows.42684/
Regarding converting converting bam to plink format - this is another topic. It is a different process. For now try to make your software working with the already available data. (in plink bed,bim fam format).
Thank you very much for your answer, I think I’ll figure it out in the future