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04-24-2024, 05:51 AM
(This post was last modified: 04-24-2024, 06:03 AM by ilabv.)
(04-23-2024, 12:43 PM)Radko Wrote: New Global25 coordinates (Avar, Sarmatian, Gepid, etc. samples including labels from "Network of large pedigrees reveals social practices of Avar communities" study) based on the official genotype data - https://drive.google.com/file/d/1xGPQI6c...sp=sharing
Official genotype data - https://server.poseidon-adna.org/zip_fil...rPedigrees
What is the difference between this and the raw data I posted for the same study? The distances can be quite different between yours and mine
Edit: I think yours are poorer quality, they have larger distances to the rest of my dataset..
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(04-24-2024, 05:40 AM)ilabv Wrote: (04-23-2024, 10:45 PM)Capsian20 Wrote: A female Viking warrior confirmed by genomics
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5724682/
https://en.wikipedia.org/wiki/Birka_grave_Bj_581
Is will be great to know Admixture DNA this female warrior
Is the data available for this?
https://www.ebi.ac.uk/ena/browser/view/PRJEB22507
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Gender: Male
Ethnicity: Mestizo
Nationality: Mexican
Y-DNA (P): E1b-L19 -> M183 -> PF2546
Y-DNA (M): E1b-L19 -> M183 -> PF2546
mtDNA (M): B2g1
mtDNA (P): Unknown
Country: 
04-24-2024, 06:35 AM
(This post was last modified: 04-24-2024, 06:40 AM by Jalisciense.)
(04-24-2024, 05:45 AM)ilabv Wrote: (04-23-2024, 10:00 PM)HDG33 Wrote: https://journals.plos.org/plosone/articl...ne.0299958
Where is the data?
I am not him, but I just found the study:
Shrouded in history: Unveiling the ways of life of an early Muslim population in Santarém, Portugal (8th– 10th century AD)
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10917335/
*Data Availability Statement
The data pertaining to the manuscript is available on the IsoArcH database (DOI 10.48530/isoarch.2023.007) and is accessible via the URL https://isoarch.eu/datasets/2023-007/.
23andMe: 55.5% European, 33.7% Indigenous American, 4.2% WANA, 3.4% SSA and 3.2% Unassigned
AncestryDNA: 57.27% Europe, 35.81% Indigenous Americas-Mexico, 3.46% MENA and 3.45% SSA
FamilyTreeDNA: 56.9% Europe, 33% Americas, 8.2% MENA, <2% Horn of Africa and <1% Eastern India
Living DNA: 63.3% West Iberia, 34.3% Native Americas and 2.3% Yorubaland
MyHeritage DNA: 60.8% Mesoamerican & Andean, 21% European, 14.9% MENA and 3.3% Nigerian
[1] "penalty= 0.001"
[1] "Ncycles= 1000"
[1] "distance%=2.1116"
Jalisciense
Iberian EMA,50.2
Native American,34.6
Guanche,7.4
Levantine EBA,4.6
African,3.2
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Y-DNA (P): I2-A815-FGC92673-Y246976
mtDNA (M): HV0-T195C!-a24
04-24-2024, 08:16 AM
(This post was last modified: 04-24-2024, 08:24 AM by ph2ter.)
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Gender: Male
Ethnicity: Kaikavian Croatian
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Y-DNA (P): I2-A815-FGC92673-Y246976
mtDNA (M): HV0-T195C!-a24
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(04-24-2024, 08:16 AM)ph2ter Wrote: ![[Image: Hungary-Middle-Tisza-LSar-Hun-P-Proto-Slav-RKO013.png]](https://i.postimg.cc/KYwpQtvw/Hungary-Middle-Tisza-LSar-Hun-P-Proto-Slav-RKO013.png)
"HungaryMiddleTisza_LSarHunP" = Hungary Middle Tisza Late Sarmatian Hun Period (?)
![[Image: Screenshot-20240424-102831-Samsung-Internet.jpg]](https://i.postimg.cc/K82SYDCc/Screenshot-20240424-102831-Samsung-Internet.jpg)
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ph2ter
As seen in supplement No. 17 of McColl's work, many Hungarian Celts were genetically very Slavic.
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Gender: Male
Ethnicity: Berber
Nationality: North Africa
Y-DNA (P): E-V257(×M81)
Y-DNA (M): V
mtDNA (P): L2b
Target: CapsianWGS_scaled
Distance: 1.2510% / 0.01251049
37.2 Iberomaurusian
36.8 Early_European_Farmer
12.8 Early_Levantine_Farmer
8.0 Steppe_Pastoralist
4.8 SSA
0.4 Iran_Neolithic
FTDNA : 91% North Africa +<2% Bedouin + <2 Southern-Levantinfo + <1 Sephardic Jewish + 3% Malta + 3% Iberian Peninsula
23andME : 100% North Africa
WGS ( Y-DNA and mtDNA)
Y-DNA: E-A30032< A30480 ~1610 CE
mtDNA: V25b 800CE ? ( age mtDNA not accurate )
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Y-DNA (P): E-V257(×M81)
Y-DNA (M): V
mtDNA (P): L2b
(04-24-2024, 06:19 AM)teepean Wrote: (04-24-2024, 05:40 AM)ilabv Wrote: (04-23-2024, 10:45 PM)Capsian20 Wrote: A female Viking warrior confirmed by genomics
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5724682/
https://en.wikipedia.org/wiki/Birka_grave_Bj_581
Is will be great to know Admixture DNA this female warrior
Is the data available for this?
https://www.ebi.ac.uk/ena/browser/view/PRJEB22507
Thanks you
Target: CapsianWGS_scaled
Distance: 1.2510% / 0.01251049
37.2 Iberomaurusian
36.8 Early_European_Farmer
12.8 Early_Levantine_Farmer
8.0 Steppe_Pastoralist
4.8 SSA
0.4 Iran_Neolithic
FTDNA : 91% North Africa +<2% Bedouin + <2 Southern-Levantinfo + <1 Sephardic Jewish + 3% Malta + 3% Iberian Peninsula
23andME : 100% North Africa
WGS ( Y-DNA and mtDNA)
Y-DNA: E-A30032< A30480 ~1610 CE
mtDNA: V25b 800CE ? ( age mtDNA not accurate )
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Gender: Male
Ethnicity: Kaikavian Croatian
Nationality: Croatian
Y-DNA (P): I2-A815-FGC92673-Y246976
mtDNA (M): HV0-T195C!-a24
The new Hungarian early Slavic samples put on my IA PCA:
![[Image: Poland-IA-MA-april.jpg]](https://i.postimg.cc/zGsx4MQ7/Poland-IA-MA-april.jpg)
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(04-24-2024, 05:45 AM)ilabv Wrote: (04-23-2024, 10:00 PM)HDG33 Wrote: https://journals.plos.org/plosone/articl...ne.0299958
Where is the data?
No data for the moment
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(04-24-2024, 11:22 AM)Capsian20 Wrote: https://pubmed.ncbi.nlm.nih.gov/36182700/
Weirdly, I get this from the data: Warning: Record PRJEB53899 has been suppressed.
https://www.ebi.ac.uk/ena/browser/view/PRJEB53899
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04-25-2024, 06:55 AM
(This post was last modified: 04-25-2024, 06:56 AM by ilabv.)
(04-24-2024, 11:57 AM)ph2ter Wrote: The new Hungarian early Slavic samples put on my IA PCA:
For whatever reason his conversion is of poorer quality. Please use mine instead:
https://genarchivist.com/showthread.php?...5#pid14115
Converted them a month ago
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04-25-2024, 10:02 AM
(This post was last modified: 04-25-2024, 12:37 PM by Radko.)
(04-25-2024, 06:55 AM)ilabv Wrote: For whatever reason his conversion is of poorer quality.
It's not "my" conversion but official genotype data uploaded to Poseidon (archaeogenetic data management provided by Max Planck Institute).
https://server.poseidon-adna.org/packages returns a JSON list of all packages
https://server.poseidon-adna.org/zip_file/<package_name> returns a complete zip file of the package with the given name
More about Poseidon: https://www.biorxiv.org/content/10.1101/...180v2.full
From "Network of large pedigrees reveals social practices of Avar communities" (Data Availability):
The haploid genotype data are available through the Poseidon framework via GitHub at https://github.com/poseidon-framework/co...rPedigrees
https://www.nature.com/articles/s41586-024-07312-4
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Nationality: North Africa
Y-DNA (P): E-V257(×M81)
Y-DNA (M): V
mtDNA (P): L2b
(04-25-2024, 06:54 AM)ilabv Wrote: (04-24-2024, 11:22 AM)Capsian20 Wrote: https://pubmed.ncbi.nlm.nih.gov/36182700/
Weirdly, I get this from the data: Warning: Record PRJEB53899 has been suppressed.
https://www.ebi.ac.uk/ena/browser/view/PRJEB53899
this strange
Target: CapsianWGS_scaled
Distance: 1.2510% / 0.01251049
37.2 Iberomaurusian
36.8 Early_European_Farmer
12.8 Early_Levantine_Farmer
8.0 Steppe_Pastoralist
4.8 SSA
0.4 Iran_Neolithic
FTDNA : 91% North Africa +<2% Bedouin + <2 Southern-Levantinfo + <1 Sephardic Jewish + 3% Malta + 3% Iberian Peninsula
23andME : 100% North Africa
WGS ( Y-DNA and mtDNA)
Y-DNA: E-A30032< A30480 ~1610 CE
mtDNA: V25b 800CE ? ( age mtDNA not accurate )
|
![[Image: Hungary-Middle-Tisza-Avar-Period-Slavic-RKF188.png]](https://i.postimg.cc/cH39z6vH/Hungary-Middle-Tisza-Avar-Period-Slavic-RKF188.png)
![[Image: Hungary-Middle-Tisza-Avar-Period-Slav-RKF106.png]](https://i.postimg.cc/0jqW1xSC/Hungary-Middle-Tisza-Avar-Period-Slav-RKF106.png)
![[Image: Hungary-Middle-Tisza-Gepid-Period-Slavo-Celt-RKO007.png]](https://i.postimg.cc/wvkJ3dP2/Hungary-Middle-Tisza-Gepid-Period-Slavo-Celt-RKO007.png)
![[Image: Hungary-Middle-Tisza-Avar-Period-Slav-lo...RKF183.png]](https://i.postimg.cc/mk5S2szq/Hungary-Middle-Tisza-Avar-Period-Slav-localmix-RKF183.png)
![[Image: Hungary-Middle-Tisza-Avar-Period-Slav-local-RKC004.png]](https://i.postimg.cc/281w9Vgf/Hungary-Middle-Tisza-Avar-Period-Slav-local-RKC004.png)
![[Image: Hungary-Middle-Tisza-Avar-Period-Slav-local-RKF134.png]](https://i.postimg.cc/wxf2khfV/Hungary-Middle-Tisza-Avar-Period-Slav-local-RKF134.png)
