If there are studies with data that hasnt been converted to G25 provide them here

[ilabv]

Bioarchaeological and paleogenomic profiling of the unusual Neolithic burial from Grotta di Pietra Sant’Angelo (Calabria, Italy): https://www.nature.com/articles/s41598-023-39250-y

Scaled

neolithic_calabria:SLBDS,0.117238,0.176702,0.00528,-0.095931,0.050163,-0.041276,-0.010575,-0.010615,0.033133,0.079637,0.005684,0.012889,-0.017839,-0.000275,-0.040445,-0.0179,0.01343,0.010895,0.002263,-0.004377,-0.009858,0.008779,-0.004683,-0.004458,-0.000599

Raw

neolithic_calabria:SLBDS,0.0103,0.0174,0.0014,-0.0297,0.0163,-0.0148,-0.0045,-0.0046,0.0162,0.0437,0.0035,0.0086,-0.012,-0.0002,-0.0298,-0.0135,0.0103,0.0086,0.0018,-0.0035,-0.0079,0.0071,-0.0038,-0.0037,-0.0005

[ilabv]

That's it for my backlog of ancient DNA samples. If you guys find any more let me know

[TanTin]

Datasets
2024
Genotypes of ancient individuals analyzed in Sirak et al. Nat Ecol Evol 2024
(https://reich.hms.harvard.edu/datasets)

Do we have this in G25 ?

[AimSmall]

Datasets
2024
Genotypes of ancient individuals analyzed in Sirak et al. Nat Ecol Evol 2024
(https://reich.hms.harvard.edu/datasets)

Do we have this in G25 ?
I just did a projection of this data on my PCA and I don't know what to tell you guys:  these are more like Vanuatu and Micronesia.  And this is a small island south of Yemen.
It seems these could be relative  to some migration wave  to Oceania.

https://genarchivist.com/showthread.php?tid=530&pid=10520#pid10520

[Megalophias]

Datasets
2024
Genotypes of ancient individuals analyzed in Sirak et al. Nat Ecol Evol 2024
(https://reich.hms.harvard.edu/datasets)

Do we have this in G25 ?
I just did a projection of this data on my PCA and I don't know what to tell you guys:  these are more like Vanuatu and Micronesia.  And this is a small island south of Yemen.
It seems these could be relative  to some migration wave  to Oceania.

They are in G25 and they are like Yemenis, definitely not like Oceanians at all. Not sure what is going on!

[TanTin]

Datasets
2024
Genotypes of ancient individuals analyzed in Sirak et al. Nat Ecol Evol 2024
(https://reich.hms.harvard.edu/datasets)

Do we have this in G25 ?
I just did a projection of this data on my PCA and I don't know what to tell you guys:  these are more like Vanuatu and Micronesia.  And this is a small island south of Yemen.
It seems these could be relative  to some migration wave  to Oceania.

They are in G25 and they are like Yemenis, definitely not like Oceanians at all. Not sure what is going on!

That was my mistake, thanks. An error in my template for the projection.

[alexfritz]

is the Pompeian (f1R_IRA) from this paper already on G25 ?
data availability

[ilabv]

is the Pompeian (f1R_IRA) from this paper already on G25 ?
data availability

Yes:

Italy_Pompeii_Roman.SG:f1R.SG__AD_79__Cov_33.78%,0.097888,0.144205,-0.035449,-0.068476,0.003385,-0.018128,-0.00235,0.001385,0.00859,0.017859,0.016239,-0.000749,-0.000595,0.00523,0.003664,-0.016706,-0.00665,-0.000127,-0.006662,-0.009505,-0.007112,0.00371,0.001479,-0.006989,0.006466

[ph2ter]

is the Pompeian (f1R_IRA) from this paper already on G25 ?
data availability

Yes:

Italy_Pompeii_Roman.SG:f1R.SG__AD_79__Cov_33.78%,0.097888,0.144205,-0.035449,-0.068476,0.003385,-0.018128,-0.00235,0.001385,0.00859,0.017859,0.016239,-0.000749,-0.000595,0.00523,0.003664,-0.016706,-0.00665,-0.000127,-0.006662,-0.009505,-0.007112,0.00371,0.001479,-0.006989,0.006466

IA-Roman similarity map (this Pompeian looks Anatolian):

[rafc]

If it's possible to get coordinates (and/or haplogroups) from this study, would be nice:

https://www.ebi.ac.uk/ena/browser/view/PRJNA1023923

[ilabv]

If it's possible to get coordinates (and/or haplogroups) from this study, would be nice:

https://www.ebi.ac.uk/ena/browser/view/PRJNA1023923

I can do them yes, unfortunately they are no submitted FTPs so the sample labels are confusing

[Motolinea]

Davidsky was asked in the chat
"could anyone upload to G25 these Pyrenean Catalan samples from this study ? Here are the plink files, scroll down for the download button:

https://figshare.com/articles/dataset/Ge...s/21404643"

Yep, that would be awesome to have them, thanks.

[Capitalis]

Millennium-Old Pathogenic Mendelian Mutation Discovery for Multiple Osteochondromas from a Gaelic Medieval Graveyard

ENA Browser (ebi.ac.uk)

If these have been converted please reply with the G25 coordinates. I checked Ajeje's linked G25 file and they weren't there. I checked the supplements for coverage but I couldn't find it.

[Арсен]

The Genetic Origin of the Indo-Europeans


https://www.biorxiv.org/content/10.1101/...y-material

[ilabv]

The Genetic Origin of the Indo-Europeans


https://www.biorxiv.org/content/10.1101/...y-material

Is the data available? I don't think so