I was trying to reproduce Lazaridis 2022 Southern Arc paper models with qpadm when I realized that there is a persistent EHG in South Caucasian farmers. It is low level, and I changed various right pops but it did not disappear.
What You think about it? Do I do something wrong with right pops or its a real thing. If it is real can we expect that in Upper Paleolithic there was EHG like ancestry in Caspian basin similar to WHG in Dzudzuana in Black sea basin. Or its a recent event.
Then in Late Chalcholithic the EHG increase as expected in samples from Areni cave. This increase is related to Soyuq Bulag kurgans. Which appear in NW Iran also, in Se Girdan.
I use Rstudio
Right pops used
right=c('Mbuti.DG', 'Russia_Kostenki14.SG', 'Russia_MA1_HG.SG', 'Italy_North_Villabruna_HG', 'Russia_Sidelkino_HG.SG', 'China_Tianyuan', 'Czech_Vestonice16', 'Ethiopia_4500BP.DG', 'Russia_Ust_Ishim.DG', 'Belgium_UP_GoyetQ116_1','Switzerland_Bichon.SG','Russia_LakeBaikal_N.SG','Iran_ShahrISokhta_BA2','Georgia_Satsurblia.SG','Turkey_Boncuklu_N','Russia_Samara_EBA_Yamnaya','Indian_GreatAndaman_100BP.SG','Morocco_Iberomaurusian')
What You think about it? Do I do something wrong with right pops or its a real thing. If it is real can we expect that in Upper Paleolithic there was EHG like ancestry in Caspian basin similar to WHG in Dzudzuana in Black sea basin. Or its a recent event.
Then in Late Chalcholithic the EHG increase as expected in samples from Areni cave. This increase is related to Soyuq Bulag kurgans. Which appear in NW Iran also, in Se Girdan.
I use Rstudio
Right pops used
right=c('Mbuti.DG', 'Russia_Kostenki14.SG', 'Russia_MA1_HG.SG', 'Italy_North_Villabruna_HG', 'Russia_Sidelkino_HG.SG', 'China_Tianyuan', 'Czech_Vestonice16', 'Ethiopia_4500BP.DG', 'Russia_Ust_Ishim.DG', 'Belgium_UP_GoyetQ116_1','Switzerland_Bichon.SG','Russia_LakeBaikal_N.SG','Iran_ShahrISokhta_BA2','Georgia_Satsurblia.SG','Turkey_Boncuklu_N','Russia_Samara_EBA_Yamnaya','Indian_GreatAndaman_100BP.SG','Morocco_Iberomaurusian')