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Has anyone used ADMIXTURE? Were there any problems? I installed WSL Ubuntu 20.04 for Windows, downloaded and unpacked Admixture from the official site
https://dalexander.github.io/admixture/download.html.
I have my plink files and unpacked Admixture in my working directory. But when I run for example
admixture data.bed 3
then the message "admixture: command not found" appears. What could be the problem?
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(10-12-2023, 09:14 AM)Gordius Wrote: Has anyone used ADMIXTURE? Were there any problems? I installed WSL Ubuntu 20.04 for Windows, downloaded and unpacked Admixture from the official site https://dalexander.github.io/admixture/download.html.
I have my plink files and unpacked Admixture in my working directory. But when I run for example
admixture data.bed 3
then the message "admixture: command not found" appears. What could be the problem?
On linux, to run a program that is in the current directory you must add ./ in front. So that would give:
./admixture data.bed 3
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(10-12-2023, 11:55 AM)crashdoc Wrote: (10-12-2023, 09:14 AM)Gordius Wrote: Has anyone used ADMIXTURE? Were there any problems? I installed WSL Ubuntu 20.04 for Windows, downloaded and unpacked Admixture from the official site https://dalexander.github.io/admixture/download.html.
I have my plink files and unpacked Admixture in my working directory. But when I run for example
admixture data.bed 3
then the message "admixture: command not found" appears. What could be the problem?
On linux, to run a program that is in the current directory you must add ./ in front. So that would give:
./admixture data.bed 3
-bash: ./admixture: Permission denied
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10-12-2023, 05:18 PM
(This post was last modified: 10-12-2023, 05:21 PM by crashdoc.)
(10-12-2023, 12:15 PM)Gordius Wrote: -bash: ./admixture: Permission denied
It seems admixture is not allowed as an executable file.
try:
chmod +x admixture
it should allow its execution
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Gender: Male
Ethnicity: Colonial American
Nationality: American
Y-DNA (P): R1b-U152 >R-FTA96415
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mtDNA (M): J1b1a1a
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How goes with your Admixture endeavors?
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(10-14-2023, 04:08 PM)AimSmall Wrote: How goes with your Admixture endeavors?
It is still too early to say. I'm trying to figure it out.
