05-02-2024, 06:03 PM
As far as I can tell yes f2_from_precomp is effectively qpFstats with a different name. As such it is also very fast like qpFstats.
I have to use an abbreviated dataset to prepare the F2 data (which is the commend extract_f2), not to use it (f2_from_precomp), again just like I have to with qpFstats on admixtools1.
I don't think F2_from_geno will solve anything. If anything it might slow it down if the name reflects how it works.
I have to use an abbreviated dataset to prepare the F2 data (which is the commend extract_f2), not to use it (f2_from_precomp), again just like I have to with qpFstats on admixtools1.
I don't think F2_from_geno will solve anything. If anything it might slow it down if the name reflects how it works.