If there are studies with data that hasnt been converted to G25 provide them here

[miquirumba]

I see ancient celtic-basque samples in Theytree https://www.theytree.com/portal/index/sa...ient%20DNA
but I cannot find their G25 in updated ancient G25 sheet
Do you know if they were processed?
https://www.nature.com/articles/s41467-024-45438-1
https://www.ebi.ac.uk/ena/browser/view/PRJEB71003

Down Syndrome etc samples from this study: https://www.nature.com/articles/s41467-024-45438-1

Code:

Scaled:
Trisomy_Study:CRU013_ss.A0101,0.114961,0.148267,0.05242,0.008075,0.065858,0.001952,-0.010575,0.005077,0.029656,0.042461,-0.009581,0.01139,-0.021258,-0.020368,0.014115,-0.006629,-0.005867,0.003801,0.002388,-0.003377,0.009358,-0.000989,-0.007888,-0.009158,0.004191
Trisomy_Study:CRU024_ss.A0101,0.124067,0.147252,0.052797,0.005168,0.060934,-0.000279,-0.009165,0.002308,0.02352,0.03991,-0.00406,0.011989,-0.020961,-0.026699,0.005565,-0.006895,0.004433,-0.003167,0.007919,-0.007253,0.01672,0.002473,-0.010106,-0.010724,-0.000718
Trisomy_Study:ERE004_ss.A0101,0.106994,0.14319,0.04714,0.007106,0.061858,-0.003626,-0.005875,-0.003923,0.03211,0.042279,-0.001949,0.003747,-0.008028,-0.003441,0.004343,-0.001326,0.001956,0.002407,0.011061,-0.005253,0.009858,0.001607,-0.015283,-0.017352,0.000838

Unscaled:
Trisomy_Study:CRU013_ss.A0101,0.0101,0.0146,0.0139,0.0025,0.0214,0.0007,-0.0045,0.0022,0.0145,0.0233,-0.0059,0.0076,-0.0143,-0.0148,0.0104,-0.005,-0.0045,0.003,0.0019,-0.0027,0.0075,-0.0008,-0.0064,-0.0076,0.0035
Trisomy_Study:CRU024_ss.A0101,0.0109,0.0145,0.014,0.0016,0.0198,-0.0001,-0.0039,0.001,0.0115,0.0219,-0.0025,0.008,-0.0141,-0.0194,0.0041,-0.0052,0.0034,-0.0025,0.0063,-0.0058,0.0134,0.002,-0.0082,-0.0089,-0.0006
Trisomy_Study:ERE004_ss.A0101,0.0094,0.0141,0.0125,0.0022,0.0201,-0.0013,-0.0025,-0.0017,0.0157,0.0232,-0.0012,0.0025,-0.0054,-0.0025,0.0032,-0.001,0.0015,0.0019,0.0088,-0.0042,0.0079,0.0013,-0.0124,-0.0144,0.0007

Thanks a lot!

great job

I had K36 simulated G25 from Genoplot in 23andme_v3+5 combined SNPs (WGSExtract) with strange results. I checked your coods. in my calculator Basque-Iberian and fit is incredible fine for theses 3 samples without foreigner pops (except Hallstatt and Central Europe BB of course)
sample: Custom:ERE004 ss.A0101
distance: 1.57
Bell Beaker: 27.8
Bell Beaker Bavaria: 15.8
Iberia SE BA Villena: 12
Iberia East IA: 8.4
French Occitanie: 7.8
Basque Navarre North: 6.4
Basque Gipuzkoa: 6.4
Iberia ElMiron: 6.2
Iberia Central CA Afr: 5.8
Basque Lower Navarre: 3.4
Basque Araba: 0
Bell Beaker Iberia: 0
Basque French: 0
Basque Spanish: 0
Basque Gipuzkoa Southwest: 0
Spanish Navarra: 0
Basque Biscay: 0
French Bearn: 0
Iberia Argar Bastida: 0

sample: Custom:CRU024 ss.A0101
distance: 1.33
Bell Beaker: 0
Bell Beaker Bavaria: 0
Iberia SE BA Villena: 0
Iberia East IA: 25.2
French Occitanie: 20
Basque Navarre North: 0
Basque Gipuzkoa: 0
Iberia ElMiron: 0
Iberia Central CA Afr: 0
Basque Lower Navarre: 0
Basque Araba: 0
Bell Beaker Iberia: 18.8
Basque French: 0
Basque Spanish: 0
Basque Gipuzkoa Southwest: 5.6
Spanish Navarra: 0
Basque Biscay: 14
French Bearn: 11.8
Iberia Argar Bastida: 4.6

sample: Custom:CRU013 ss.A0101
distance: 1.02
Bell Beaker: 0
Bell Beaker Bavaria: 0
Iberia SE BA Villena: 0
Iberia East IA: 18.6
French Occitanie: 0
Basque Navarre North: 8.6
Basque Gipuzkoa: 0
Iberia ElMiron: 0
Iberia Central CA Afr: 4.4
Basque Lower Navarre: 0
Basque Araba: 18.4
Bell Beaker Iberia: 14
Basque French: 13.4
Basque Spanish: 12
Basque Gipuzkoa Southwest: 8
Spanish Navarra: 2.6
Basque Biscay: 0
French Bearn: 0
Iberia Argar Bastida: 0

https://shared.genoplot.com/file/genofil...8e9ae9eb7e