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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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Norfern-Ostrobothnian Wrote: (04-22-2024, 07:00 PM)
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I highly doubt that there are truly ancestral forms of any haplogroup in the present day, because that would require absolutely no mutations to ... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-22-2024, 07:11 PM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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Desdonas Wrote: (04-22-2024, 07:40 AM)
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@Jerome @Merriku
A phylogeny tree of H (time based on ftdna or Yfull)
H (L901) (45k/45.6k)
H2-P96 (Near East)
H1'3-M2826 (45k/43.1k)
H1-L9... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-22-2024, 06:42 PM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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Desdonas Wrote: (04-19-2024, 10:56 PM)
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@Merriku
Where do you think H1 diverged from H2? I guess Makran coast or lower Indus, with one headed Southeast while another West.
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That looks much m... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-20-2024, 08:31 AM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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Desdonas Wrote: (04-19-2024, 03:47 AM)
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alchemist223 Wrote: (04-18-2024, 05:34 PM)
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Desdonas Wrote: (04-09-2024, 03:19 AM)
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@Kale @kolompar
What do you think of India as a hub for early Eu... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-19-2024, 08:24 AM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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Desdonas Wrote: (04-09-2024, 05:21 PM)
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pelop Wrote: (04-09-2024, 04:23 PM)
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Merriku Wrote: (04-09-2024, 09:17 AM)
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I am skeptical of those Indian Fs. Considering the amount of Indian private... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-09-2024, 05:46 PM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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pelop Wrote: (04-09-2024, 04:23 PM)
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Merriku Wrote: (04-09-2024, 09:17 AM)
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I am skeptical of those Indian Fs. Considering the amount of Indian private samples I think F should have turned up by... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-09-2024, 05:40 PM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
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Desdonas Wrote: (04-09-2024, 03:19 AM)
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@Kale @kolompar
What do you think of India as a hub for early Eurasian population? I have seen that many haplogroup migration maps locate the origin of F ... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-09-2024, 09:17 AM |
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Thread: Basal Eurasian discussion
Post: RE: Basal Eurasian discussion
| I am going by the yfull TMRCAs and estimated formation ages- the current TMRCA of F and the founders of blocks GHIJK to K appear very close in age. I think these founders were born in the same populat... |
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Merriku |
Ancient (aDNA)
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247 |
16,796 |
04-06-2024, 07:17 PM |
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Thread: New papers on human evolution
Post: RE: New papers on human evolution
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old europe Wrote: (03-19-2024, 07:09 AM)
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Quote from the paper
The Indian cline has previously been shown to reflect variable proportions of ancestry from two ancestral groups: the Ancestral No... |
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Merriku |
Human Evolution
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12 |
1,109 |
03-19-2024, 05:37 PM |
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Thread: Converting from fastq to plink
Post: RE: Converting from fastq to plink
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Merriku Wrote: (01-06-2024, 05:41 PM)
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I would like to add something to crashdoc's excellent posts. You can add rsids to your vcf by annotating them with either a dbsnp vcf file or from a tab-delim... |
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Merriku |
Other
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16 |
1,118 |
01-21-2024, 05:48 AM |
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Thread: Converting from fastq to plink
Post: RE: Converting from fastq to plink
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TanTin Wrote: (01-11-2024, 01:45 AM)
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Quote:
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4.1) PREPARING A FILE TO ANNOTATE WITH SNP IDS
start with the BIM file of a 1240k set
we need to keep only columns 1,2&4 and invert 2&4. We al... |
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Merriku |
Other
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16 |
1,118 |
01-11-2024, 04:56 AM |
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Thread: Converting from fastq to plink
Post: RE: Converting from fastq to plink
| I would like to add something to crashdoc's excellent posts. You can add rsids to your vcf by annotating them with either a dbsnp vcf file or from a tab-delimited file as described by crashdoc. But yo... |
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Merriku |
Other
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16 |
1,118 |
01-06-2024, 05:41 PM |
